BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023C06SP1|AL428024
(1098 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1444 2158 0.0
3x_Contig1771 177 6e-44
3x_Contig1684 175 2e-43
3x_Contig1747 171 4e-42
3x_Contig1564 165 2e-40
3x_Contig753 155 2e-37
3x_Contig208 131 3e-30
>3x_Contig1444
Length = 7580
Score = 2158 bits (1088), Expect = 0.0
Identities = 1096/1098 (99%), Gaps = 1/1098 (0%)
Strand = Plus / Minus
Query: 1 gatctgaaatcagagtcatcaagatgactaaatatattcaccaatacctcaaccggtaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6026 gatctgaaatcagagtcatcaagatgactaaatatattcaccaatacctcaaccggtaag 5967
Query: 61 gaagataaagaaggcctactcatccagcacctgttgaaattaagtcactatcgaaacccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5966 gaagataaagaaggcctactcatccagcacctgttgaaattaagtcactatcgaaacccc 5907
Query: 121 tctaaaaagaccagccgaaacttgatctttggttatcttcttctctatttgagtctatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5906 tctaaaaagaccagccgaaacttgatctttggttatcttcttctctatttgagtctatat 5847
Query: 181 tgatgagatacgttaataaatcgtaaaacctttaaatatactcaaaagttttactatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5846 tgatgagatacgttaataaatcgtaaaacctttaaatatactcaaaagttttactatgaa 5787
Query: 241 ctagcgatatgatgaagaaaaaatatggtatgtgcaaaaaaagaatggttcctagcggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5786 ctagcgatatgatgaagaaaaaatatggtatgtgcaaaaaaagaatggttcctagcggga 5727
Query: 301 tcgaaccgctgatccccgcgttattagcacggtgccttaaccaactgggccaaggaacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5726 tcgaaccgctgatccccgcgttattagcacggtgccttaaccaactgggccaaggaacca 5667
Query: 361 atttgtggttgtgggagcgaaaaaggcaatccatgacgaaaattgtggatcacgtgcctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5666 atttgtggttgtgggagcgaaaaaggcaatccatgacgaaaattgtggatcacgtgcctg 5607
Query: 421 gagccattaataaaacctagctgaacacggtttatcatgaaaaacctttgattaatgaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5606 gagccattaataaaacctagctgaacacggtttatcatgaaaaacctttgattaatgaca 5547
Query: 481 ccgatgttgaagatgctcttaatactacaagatgctgttcgatcgtaatgacaagaaccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5546 ccgatgttgaagatgctcttaatactacaagatgctgttcgatcgtaatgacaagaaccg 5487
Query: 541 tacaatatgggtttgagtttagatttgtcgagaagaaaatgcttgaattgctaattatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5486 tacaatatgggtttgagtttagatttgtcgagaagaaaatgcttgaattgctaattatat 5427
Query: 601 gtacatatttcctacatctataactgagtccatgagtagaaaaatgagctcttgggtatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5426 gtacatatttcctacatctataactgagtccatgagtagaaaaatgagctcttgggtatc 5367
Query: 661 gtcaatcgcatttcttgcagcgttacgcaaacttgataggttcgaagatcaaatggtgcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5366 gtcaatcgcatttcttgcagcgttacgcaaacttgataggttcgaagatcaaatggtgcc 5307
Query: 721 ttcattgtggatgaattgtagtttgctgattgtatagcagagtcttctgtgaatctgaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5306 ttcattgtggatgaattgtagtttgctgattgtatagcagagtcttctgtgaatctgaca 5247
Query: 781 gaaatcgcacctctctcagtgataagctcttggtttgccaagttttcccatacattcttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5246 gaaatcgcacctctctcagtgataagctcttggtttgccaagttttcccatacattcttc 5187
Query: 841 atgtcgtgtttagtccacattttgaacctatcagcgaaggtggtcttatgaatcttcccc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5186 atgtcgtgtttagtccacattttgaacctatcagcgaaggtggtcttatgaatcttcccc 5127
Query: 901 aatttagaaaattcttcatgtaccaaagtcaaattgatatgttcgtcattctttaaagcc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5126 aatttagaaaattcttcatgtaccaaagtcaaattgatatgttcgtcattctttaaagcc 5067
Query: 961 actctacaagcagatatcaaaatagctaactctaaatcagatagtgacaagatcttagct 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5066 actctacaagcagatatcaaaatagctaactctaaatcagatagtgacaagatcttagct 5007
Query: 1021 ggaaattgaatctaagagttgattcgccaagtacttttttattttgcygcatgttttgat 1080
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5006 -gaaattgaatctaagagttgattcgccaagtacttttttattttgctgcatgttttgat 4948
Query: 1081 gctctcaactagttcaga 1098
||||||||||||||||||
Sbjct: 4947 gctctcaactagttcaga 4930
>3x_Contig1771
Length = 25932
Score = 177 bits (89), Expect = 6e-44
Identities = 89/89 (100%)
Strand = Plus / Minus
Query: 276 aaaaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgc 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12986 aaaaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgc 12927
Query: 336 cttaaccaactgggccaaggaaccaattt 364
|||||||||||||||||||||||||||||
Sbjct: 12926 cttaaccaactgggccaaggaaccaattt 12898
>3x_Contig1684
Length = 14609
Score = 175 bits (88), Expect = 2e-43
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 277 aaaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcc 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9463 aaaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcc 9522
Query: 337 ttaaccaactgggccaaggaaccaattt 364
||||||||||||||||||||||||||||
Sbjct: 9523 ttaaccaactgggccaaggaaccaattt 9550
>3x_Contig1747
Length = 15671
Score = 171 bits (86), Expect = 4e-42
Identities = 86/86 (100%)
Strand = Plus / Minus
Query: 276 aaaaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgc 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7762 aaaaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgc 7703
Query: 336 cttaaccaactgggccaaggaaccaa 361
||||||||||||||||||||||||||
Sbjct: 7702 cttaaccaactgggccaaggaaccaa 7677
>3x_Contig1564
Length = 11038
Score = 165 bits (83), Expect = 2e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 278 aaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcct 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5333 aaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcct 5392
Query: 338 taaccaactgggccaaggaacca 360
|||||||||||||||||||||||
Sbjct: 5393 taaccaactgggccaaggaacca 5415
>3x_Contig753
Length = 2743
Score = 155 bits (78), Expect = 2e-37
Identities = 78/78 (100%)
Strand = Plus / Minus
Query: 284 aatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgccttaacca 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2065 aatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgccttaacca 2006
Query: 344 actgggccaaggaaccaa 361
||||||||||||||||||
Sbjct: 2005 actgggccaaggaaccaa 1988
>3x_Contig208
Length = 1357
Score = 131 bits (66), Expect = 3e-30
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 278 aaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcct 337
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1288 aaaaataatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcct 1347
Query: 338 taaccaactg 347
||||||||||
Sbjct: 1348 taaccaactg 1357
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8712
Number of Sequences: 1807
Number of extensions: 8712
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 7
length of query: 1098
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1082
effective length of database: 10,329,639
effective search space: 11176669398
effective search space used: 11176669398
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)